from_gifti

Import in python using from mcot.core._scripts.to_dataframe import from_gifti

mcot.core._scripts.to_dataframe.from_gifti(img: Union[str, nibabel.gifti.gifti.GiftiImage], mask: Union[None, str, nibabel.nifti1.Nifti1Image, numpy.ndarray] = None, hemisphere: Optional[str] = None, basename='')[source]

Converts a GIFTI image into a pandas dataframe

Parameters:
  • img – input GIFTI image
  • mask – input mask (default: include all vertices)
  • hemisphere – hemisphere of the data
  • basename – basename of the columns
Returns:

pandas dataframe with unmasked vertices