_scripts parcel combine

Usage

Run using mc_script _scripts parcel combine after installation or using ~ndcn0236/bin/mc_script _scripts parcel combine on jalapeno.

Import in python using from mcot.core._scripts.parcel import combine

Documentation

Combines two parcellations into a single parcellation by multiplying them

Functions

run(arr1, label1, arr2, label2)

Combines the two parcellations into one by multiplying

CLI interface

add_to_parser(parser)	Creates the parser of the command line arguments
run_from_args(args)	Runs the script based on a Namespace containing the command line arguments